CDS

Accession Number TCMCG017C10625
gbkey CDS
Protein Id OMP00745.1
Location join(7133..7273,7473..7511,7756..7893,8267..8406,8545..8651,8980..9080,9298..9693)
GeneID InterPro:IPR001841
Organism Corchorus olitorius
locus_tag COLO4_12403

Protein

Length 353aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01014915.1
Definition Zinc finger, RING-type [Corchorus olitorius]
Locus_tag COLO4_12403

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10640        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051059        [VIEW IN EMBL-EBI]
GO:0051090        [VIEW IN EMBL-EBI]
GO:0051091        [VIEW IN EMBL-EBI]
GO:0051092        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGAAGAAGAGGAAGTGAAGATTGAAGTGGAAGCGGTGCAATCTGTTTACGGGGAGGATTGCCAGGTTATTGAATCGTATCCTCCGTGTATTCACCTCCACATCAAGCCTCGCACCGCCGATGTCTCTTCCCAACAGTTTGTCGAAGCAGTTATTGGAATTCGAGCTACCTCCAAGTATCCTAAGGAGCCTCCTCTTATTTATCTCATAGATTCCAAGGGTCTTGATGAACAAAGGCAAACACATCTCATAAGTAGCATACGAGACAGAGCGTGTGAGCTACCCTCTTGTTTTATGCTTGTAGCAATTTGTGAGGAAGCGGTTGAGAAACTTTCTTCAATGAATCACCCTGATGGGGATTGTCCGTTGTGTTTATTTCCTTTGATGTCAGAAGATGACCAGAAAGAAACGTTGCCTTTTATGAAGCTGATGTCCTGTTTTCATTGTTTTCATAGTGAGTGCATTATTAGATGGTGGACTTGGATTCAAACTGATAACAAGGATGCTAAGAATACATCCAGTTCAACATTGTCTCTTTCAAGGAACAGAGGAAGTGGACAAGAGAAAGAAAGCATGGGAAATTGTCCTGTTTGCCGTAAGGTTTTTCATGCCAAGGATATTGAACATGTGCTTGACCTGGTTGGCACTCATTCTTCTCAACAGAGTTTGGACAGAACTGAAGTTAAAGATGATGAAAGTGTTATTCATTCCGAATTTGAGAATATAAGAAGGCAGAAATTTGAAGCGATATTAAAGCTGCAGGAAGAAAATAGTGGCTTGATTGGCTCCAAGTCCAAGAAAGACGACATTGTTGCACCTGTTACAATTACAAATGCTCAGAATCCGGCCACATTGGCTAACAGTGCTGATACCAATGAAACTACAGGGCAACAACAAAGTGATCGAGGAGCCAATGCAGAAACAAATTCCAGTAGTTCCTCAACAAGGCCTCGCACCAGTAAGCACTGGAACAACTCAGGCATGAGGAAGCACAGAGCACCAAATACAAGAAAACAAGTAAGACAATGGGTTAGAAAAGAGGATGGTGGTGCTAGATAA
Protein:  
MAEEEEVKIEVEAVQSVYGEDCQVIESYPPCIHLHIKPRTADVSSQQFVEAVIGIRATSKYPKEPPLIYLIDSKGLDEQRQTHLISSIRDRACELPSCFMLVAICEEAVEKLSSMNHPDGDCPLCLFPLMSEDDQKETLPFMKLMSCFHCFHSECIIRWWTWIQTDNKDAKNTSSSTLSLSRNRGSGQEKESMGNCPVCRKVFHAKDIEHVLDLVGTHSSQQSLDRTEVKDDESVIHSEFENIRRQKFEAILKLQEENSGLIGSKSKKDDIVAPVTITNAQNPATLANSADTNETTGQQQSDRGANAETNSSSSSTRPRTSKHWNNSGMRKHRAPNTRKQVRQWVRKEDGGAR